A machine learning repository for microbiome datasets
| Overview | |
|---|---|
| Description | Humans of varying ages from the USA, Malawi, and Venezuela |
| Study design | Cross-Sectional |
| Topic area | Geography, Age, Gender |
| Attributes | COUNTRY: GAZ:Venezuela, GAZ:United States of America, GAZ:Malawi AGE: continuous |
| Dataset notes | Infants should be analyzed separately from non-infants |
| Number of samples | 531 |
| Number of subjects | 531 |
| Other Details | |
|---|---|
| 16s hypervariable region | V4 |
| Targeted amplicon size | 282 |
| Sequencing technology | Illumina MiSeq |
| Fraction of sequences mapped to database | |
| Processed sequences | yatsunenko2012.fasta.gz |
| Raw metadata file | mapping-orig.txt |
| Raw sequence source | https://www.mg-rast.org/linkin.cgi?project=mgp401 |
| Literature source | http://www.ncbi.nlm.nih.gov/pubmed/22699611 |